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PDBsum entry 1v4g

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1v4g calculated with MOLE 2.0 PDB id
1v4g
Pores calculated on whole structure Pores calculated excluding ligands

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19 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.38 2.49 29.0 -1.34 -0.56 16.7 82 3 2 2 1 0 1 0  
2 2.19 3.55 32.2 -1.60 -0.39 25.9 81 6 5 3 4 1 1 0  
3 1.86 2.52 40.6 -1.18 -0.53 14.2 81 1 6 4 3 1 2 1  FME 1 D
4 1.40 1.41 49.5 -1.62 -0.42 26.5 79 4 6 3 5 1 1 0  
5 2.07 2.06 50.0 -0.91 -0.42 20.0 79 5 6 2 3 0 2 4  
6 1.59 1.61 50.6 -1.99 -0.60 30.2 82 4 9 3 4 0 1 0  
7 2.05 2.34 52.4 -1.73 -0.14 13.6 77 4 2 5 3 5 0 0  
8 2.08 3.77 56.2 -1.22 -0.39 16.0 87 3 5 4 4 2 2 0  
9 1.24 2.78 66.9 -1.07 -0.46 15.3 81 4 5 4 7 0 2 1  
10 2.22 2.22 67.2 -1.05 -0.42 20.8 81 5 7 2 7 0 2 4  
11 2.08 2.23 73.3 -1.11 -0.35 20.4 84 6 6 3 6 1 2 0  
12 2.53 2.97 72.9 -1.19 -0.41 20.0 84 10 6 4 8 1 2 0  
13 1.59 1.84 73.8 -0.43 -0.18 17.0 87 6 4 3 8 0 1 0  
14 1.37 2.93 75.3 -0.82 -0.22 17.4 80 5 5 2 8 2 2 1  
15 2.50 2.97 77.6 -1.40 -0.43 20.1 85 9 6 3 6 2 1 0  
16 2.28 2.24 84.7 -1.09 -0.42 16.7 88 6 5 7 6 2 2 0  
17 1.90 2.03 88.2 -1.39 -0.32 15.2 83 9 5 7 7 4 0 1  
18 2.19 2.18 89.5 -1.28 -0.43 16.4 89 6 5 6 4 3 1 0  
19 1.90 2.06 114.8 -1.41 -0.34 18.4 81 11 10 8 7 4 2 4  
20 1.86 2.44 128.7 -1.19 -0.32 18.2 83 11 10 9 9 4 5 0  
21 1.87 1.97 151.9 -1.25 -0.32 15.2 81 14 11 10 13 6 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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