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PDBsum entry 1v3m
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Pore analysis for: 1v3m calculated with  MOLE 2.0
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PDB id
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1v3m
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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1 pore,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.11 |
3.02 |
25.4 |
-1.22 |
-0.31 |
11.1 |
77 |
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2 |
1 |
0 |
2 |
4 |
1 |
0 |
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2 |
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2.19 |
2.38 |
48.4 |
-1.33 |
-0.54 |
13.0 |
93 |
2 |
4 |
7 |
7 |
0 |
2 |
0 |
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3 |
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2.95 |
3.54 |
48.7 |
-1.49 |
-0.54 |
13.9 |
97 |
1 |
7 |
11 |
6 |
0 |
0 |
0 |
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4 |
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3.48 |
3.51 |
61.3 |
-1.73 |
-0.48 |
15.0 |
84 |
2 |
5 |
5 |
4 |
3 |
2 |
0 |
GAL 1 C
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5 |
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3.51 |
3.56 |
77.5 |
-1.50 |
-0.44 |
16.8 |
85 |
3 |
8 |
6 |
5 |
3 |
2 |
0 |
GAL 1 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program