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PDBsum entry 1v3b
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Tunnel analysis for: 1v3b calculated with  MOLE 2.0
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PDB id
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1v3b
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.50 |
25.4 |
-2.54 |
-0.63 |
22.2 |
80 |
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4 |
2 |
4 |
0 |
2 |
0 |
1 |
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2 |
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1.37 |
1.51 |
20.1 |
-2.15 |
-0.69 |
18.7 |
84 |
3 |
2 |
3 |
0 |
0 |
0 |
1 |
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3 |
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1.25 |
1.58 |
21.4 |
-2.10 |
-0.70 |
18.5 |
83 |
3 |
2 |
3 |
1 |
0 |
0 |
1 |
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4 |
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1.10 |
1.36 |
15.8 |
-0.74 |
-0.41 |
8.8 |
96 |
1 |
1 |
4 |
2 |
0 |
0 |
0 |
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5 |
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1.43 |
2.03 |
16.3 |
-1.12 |
0.23 |
8.9 |
66 |
1 |
0 |
1 |
1 |
3 |
0 |
0 |
NAG 1 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program