spacer
spacer

PDBsum entry 1v0f

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) links
Protein chain A    -    representing identical chains: B C D E F PDB id
1v0f
Protein chain A highlighted
(click to view)
 
Jmol
Motifs
Secondary structure
Wiring diagram
ProMotif
15 sheets
23 beta hairpins
13 beta bulges
56 strands
5 helices
79 beta turns
6 gamma turns
Catalytic residues
R596-R647-E581
Active sites
AC5
AC6
BC5
BC6
BC7
  
Chain & (666 residues)

UniProt code: Q858B1 (Q858B1_BPK1F)   [Pfam]

structural classification (4 domains) :
Domain Links CATH no.   Class Architecture
1 3.30.750.60 = Alpha Beta 2-Layer Sandwich
2 2.120.10.10 = Mainly Beta 6 Propellor
3 2.40.30.20 = Mainly Beta Beta Barrel
4 4.10.1090.10 = Few Secondary Structures Irregular

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
CSA annotation:   
    catalytic residue
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9  BC1
 BC2  BC3  BC4  BC5  BC6
 BC7  BC8  BC9

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


  Related protein sequences in the PDB
  
spacer
spacer