spacer
spacer

Ligand clusters for UniProt code P10538

Ligand clusters for P10538: Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3

Top 6 (of 19) ligand clusters
Cluster 1.
14 ligand types
28 ligands
Cluster 2.
1 ligand type
17 ligands
Cluster 3.
1 ligand type
9 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
7 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1wdpA  
 

Structures

PDB   Schematic diagram
1wdpA    
1q6dA    
1q6fA    
1q6gA    
1bfnA    
 more ...

 

 Cluster 1 contains 14 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: MAL × 2
Maltose
PDB codes: 1wdq(A),


 
2. Ligand: DOM × 2
2'-Deoxymaltose
PDB codes: 1byd(A),


 
3. Ligand: GLC × 2
Alpha-D-Glucose
PDB codes: 1wdr(A), 1wds(A).


 
4. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 1btc(A).


 
5. Ligand: GLC-BGC × 6
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB codes: 1q6d(A), 1q6e(A), 1q6f(A), 1q6g(A), 1v3i(A), 1wds(A).


 
6. Ligand: GLC-GLC × 6
GLC=Alpha-D-Glucose.
PDB codes: 1q6c(A), 1q6d(A), 1q6e(A), 1q6g(A), 1v3i(A).


 
7. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1uko(A), 1wdp(A).


 
8. Ligand: BGC-BGC-GLC × 1
BGC=Beta-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1q6f(A).


 
9. Ligand: GLC-GLC-GLC-BGC × 1
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1byc(A).


 
10. Ligand: GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1byb(A).


 
11. Ligand: GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1v3h(A).


 
12. Ligand: GLC-GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1btc(A).


 
13. Ligand: GLC-GLC-GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1bfn(A).


 
14. Ligand: MAL-MAL × 1
MAL=Maltose.
PDB code: 1wdr(A).

 

 Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 17
Sulfate ion
PDB codes: 1bfn(A), 1btc(A), 1bya(A), 1byb(A), 1byc(A), 1byd(A), 1q6c(A), 1q6d(A), 1q6e(A), 1q6f(A), 1q6g(A), 1v3h(A), 1v3i(A), 1wdp(A), 1wdq(A), 1wdr(A), 1wds(A).

 

 Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 9
Sulfate ion
PDB codes: 1q6d(A), 1q6e(A), 1q6f(A), 1q6g(A), 1v3h(A), 1wdp(A), 1wdq(A), 1wdr(A), 1wds(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1uko(A), 1ukp(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 7
Sulfate ion
PDB codes: 1uko(A), 1ukp(A), 1v3h(A), 1wdp(A), 1wdq(A), 1wdr(A), 1wds(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1uko(A).

 

spacer

spacer