PDBsum entry 1ufd Go to PDB code:  Pore analysis for: 1ufd calculated with MOLE 2.0 PDB id 1ufd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.22 28.8 -1.11 -0.36 8.7 90 2 0 2 4 2 0 0   2 1.59 1.76 79.2 -0.20 -0.07 12.9 87 3 3 2 11 4 0 0   3 1.87 2.34 111.6 -1.03 -0.07 3.7 84 0 3 8 7 6 0 0   4 1.28 2.64 180.8 0.13 0.08 11.1 90 6 3 8 25 6 0 0   5 1.28 1.39 209.6 0.03 0.03 13.0 90 7 4 10 21 4 0 0   6 1.37 1.67 355.0 0.04 0.06 9.7 84 6 7 14 26 11 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.