PDBsum entry 1udu Go to PDB code:  Pore analysis for: 1udu calculated with MOLE 2.0 PDB id 1udu Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.37 26.2 -0.42 -0.14 9.8 81 3 1 5 4 2 1 1   2 1.42 3.44 44.8 -0.61 0.04 21.6 78 7 4 3 6 2 1 0   3 1.15 1.17 48.2 0.09 0.04 6.9 76 3 1 4 7 5 1 1  CIA 2003 B 4 1.24 1.23 48.6 0.01 0.02 6.9 76 3 1 4 7 5 1 1  CIA 1003 A 5 1.23 1.35 48.7 -0.87 0.00 18.1 77 6 2 5 4 5 0 1   6 1.41 3.43 49.3 -1.07 0.04 22.4 79 6 4 2 5 3 0 0   7 1.77 2.39 54.6 -0.11 0.19 11.1 80 3 2 3 7 2 1 0   8 1.30 1.38 75.4 0.11 0.20 4.6 71 2 0 1 9 6 0 1  CIA 1003 A CIA 2003 B 9 1.29 1.38 100.3 -0.37 0.10 10.9 71 4 1 2 9 6 1 1  CIA 2003 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.