spacer
spacer

PDBsum entry 1ua3

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 1ua3 calculated with MOLE 2.0 PDB id
1ua3
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
11 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.59 8.6 -1.26 -0.59 19.9 67 0 2 1 1 1 1 1  
2 2.12 15.0 0.14 0.36 22.1 72 2 2 0 3 2 0 0  1990 MLR A
3 2.10 15.3 0.57 0.32 14.2 79 1 3 0 3 1 0 0  1990 MLR A
4 2.17 18.9 0.41 0.46 20.1 69 1 2 0 3 2 0 0  1990 MLR A
5 1.59 7.6 -1.60 -0.09 16.3 79 2 1 1 1 1 0 0  
6 1.40 10.0 -0.59 -0.38 6.4 86 1 1 1 1 0 1 0  
7 1.54 6.3 0.09 -0.02 3.8 66 1 0 0 2 1 1 0  
8 1.40 8.1 -1.79 -0.74 27.9 78 1 2 0 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer