PDBsum entry 1u3a Go to PDB code:  Pore analysis for: 1u3a calculated with MOLE 2.0 PDB id 1u3a Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.90 2.07 26.0 -2.29 -0.71 29.5 71 4 2 0 0 1 0 0   2 1.82 2.03 28.5 -0.45 0.06 13.1 83 1 2 3 5 2 2 0  PE5 301 B 3 1.48 1.50 29.5 -0.71 0.00 12.4 77 1 2 3 3 3 2 0  PE5 401 D 4 1.52 1.64 31.4 -1.04 -0.05 11.1 83 2 2 4 4 2 2 0  PE5 401 D 5 1.20 1.40 38.2 -0.33 0.12 12.8 75 5 0 4 3 4 0 2   6 1.41 2.74 55.8 -0.97 -0.12 10.1 75 5 2 5 4 5 2 0  PE5 301 B 7 1.44 2.70 64.0 -1.62 -0.27 14.0 81 4 4 7 4 2 2 0  PE5 301 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.