spacer
spacer

PDBsum entry 1u33

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 1u33 calculated with MOLE 2.0 PDB id
1u33
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
17 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.83 5.4 -0.71 -0.80 6.4 94 1 0 1 0 0 0 0  
2 1.60 6.8 -0.50 -0.20 7.0 68 2 0 0 0 1 0 1  
3 1.60 14.3 -1.37 -0.58 13.5 77 2 2 1 0 1 0 1  
4 1.33 12.4 -0.17 -0.13 13.0 88 2 1 2 2 0 1 1  
5 1.70 6.1 -0.17 -0.14 3.9 69 1 0 0 2 1 1 0  
6 1.55 13.0 -1.54 -0.66 24.9 91 2 2 2 1 0 0 0  
7 1.33 13.8 -0.77 -0.39 22.1 92 2 2 2 2 0 0 0  
8 1.63 9.2 -1.42 -0.46 24.7 67 1 2 0 1 1 0 1  
9 1.63 5.8 -0.74 -0.32 4.9 72 1 0 1 1 2 0 0  
10 1.39 4.8 -0.90 -0.01 24.0 84 1 1 0 2 1 1 0  
11 1.51 6.4 -0.77 -0.80 3.0 109 0 0 3 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer