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PDBsum entry 1u2v

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Pore analysis for: 1u2v calculated with MOLE 2.0 PDB id
1u2v
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 1.57 35.5 -0.90 -0.45 15.8 81 1 4 1 5 0 1 0  
2 1.51 1.56 37.5 -1.12 -0.46 22.4 86 3 3 0 4 0 0 0  
3 1.70 1.85 42.5 -1.52 -0.34 17.9 79 4 3 4 3 3 2 0  
4 1.83 2.80 44.3 -1.15 -0.24 24.9 78 4 4 3 4 1 0 0  
5 1.30 1.30 49.9 -1.44 -0.35 14.1 81 5 3 4 2 3 1 0  
6 1.32 2.77 66.7 -2.12 -0.66 21.8 89 6 6 12 3 1 2 0  
7 1.72 2.00 82.5 -1.53 -0.30 20.6 76 8 8 2 4 4 3 0  CA 500 A ADP 1001 A
8 1.79 4.22 85.5 -1.57 -0.27 20.1 81 10 7 6 5 4 1 0  CA 500 A ADP 1001 A
9 1.11 1.46 97.0 -2.07 -0.46 26.4 81 10 7 4 4 2 3 0  
10 1.50 1.58 103.4 -1.54 -0.36 21.3 82 11 7 6 8 4 1 0  CA 500 A ADP 1001 A
11 1.29 1.30 106.7 -1.52 -0.40 20.1 79 10 8 2 6 4 2 0  CA 500 A ADP 1001 A
12 1.11 1.46 115.1 -1.31 -0.33 20.9 77 8 8 3 8 2 2 0  
13 1.96 2.19 146.7 -2.15 -0.41 24.9 83 18 5 9 5 3 2 0  CA 500 A ADP 1001 A
14 2.94 3.08 149.0 -1.85 -0.32 25.7 82 15 9 7 7 2 2 0  ADP 1002 B
15 1.33 1.33 150.0 -2.06 -0.44 23.2 81 17 6 5 3 3 3 0  CA 500 A ADP 1001 A
16 2.74 3.05 25.7 -1.36 -0.65 13.4 92 3 2 4 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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