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PDBsum entry 1twc

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Pore analysis for: 1twc calculated with MOLE 2.0 PDB id
1twc
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.41 25.1 -1.00 -0.37 17.0 72 3 3 1 2 1 2 0  
2 2.96 3.37 27.1 -1.53 -0.35 15.8 82 3 0 2 4 0 2 0  
3 1.40 1.40 40.4 -0.82 -0.30 19.3 78 4 6 1 4 2 0 0  
4 1.70 1.91 53.2 -1.69 -0.45 23.3 76 6 5 2 2 2 2 0  
5 3.16 4.22 54.8 -1.23 -0.28 13.1 85 6 3 6 6 1 3 0  
6 1.19 2.40 60.7 -1.68 -0.26 20.1 72 5 3 3 2 2 1 1  
7 1.19 1.75 69.5 -1.71 -0.16 20.8 75 9 5 4 2 3 2 0  
8 1.14 1.64 70.4 -0.96 -0.13 15.6 72 5 7 3 3 3 1 1  
9 1.56 3.47 92.1 -0.52 -0.17 14.4 84 4 6 7 11 1 2 0  
10 1.97 2.10 100.5 -1.68 -0.50 26.8 85 13 14 7 6 1 2 0  
11 1.17 1.71 103.5 -0.88 -0.05 17.0 76 9 6 5 6 6 2 0  
12 1.71 2.58 105.8 -2.10 -0.60 24.8 85 15 11 9 4 1 2 0  
13 2.29 4.10 110.1 -1.70 -0.32 28.6 86 15 8 6 7 2 1 0  
14 1.24 1.45 114.4 -1.25 -0.11 20.2 80 11 6 6 14 5 2 0  
15 1.51 3.36 116.1 -1.39 -0.18 21.0 84 7 3 5 6 1 3 0  
16 1.25 1.54 117.5 -1.36 -0.33 20.6 86 10 7 6 10 2 3 0  
17 1.30 1.49 121.3 -1.55 -0.41 22.0 88 11 5 5 8 0 1 0  
18 1.33 1.60 125.4 -2.07 -0.22 26.0 77 15 10 8 9 7 6 0  
19 1.77 2.58 128.3 -2.23 -0.63 29.5 84 14 20 8 5 0 2 0  
20 1.92 1.90 133.8 -1.49 -0.46 18.0 80 7 13 11 7 5 2 0  
21 1.25 1.52 141.3 -2.12 -0.45 26.8 80 14 10 5 8 2 5 0  
22 1.71 1.88 143.2 -1.59 -0.50 18.7 81 8 13 12 6 4 4 0  
23 1.25 1.46 166.7 -1.47 -0.46 23.0 86 18 11 8 13 2 1 0  
24 2.18 2.65 170.0 -1.88 -0.51 30.5 83 11 18 5 7 1 1 0  
25 1.24 1.45 172.7 -1.19 -0.41 17.1 85 11 6 7 12 1 3 0  
26 1.83 3.92 179.3 -1.51 -0.26 22.5 83 21 13 12 17 7 3 0  
27 1.74 4.09 185.3 -1.38 -0.21 18.5 82 14 8 11 16 6 5 0  
28 1.01 2.08 225.3 -1.32 -0.31 20.4 83 17 14 11 9 3 2 1  
29 1.58 2.80 296.1 -1.52 -0.39 21.0 84 21 16 17 14 5 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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