PDBsum entry 1th4 Go to PDB code:  Pore analysis for: 1th4 calculated with MOLE 2.0 PDB id 1th4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.97 3.01 43.5 -2.81 -0.77 36.1 84 3 6 2 1 1 0 0   2 1.47 1.85 47.4 -0.96 -0.32 15.4 86 3 4 7 6 1 2 0   3 1.68 2.90 47.9 -0.93 -0.39 12.4 87 3 4 8 6 1 1 0   4 1.12 2.65 68.1 -0.70 -0.22 11.0 82 4 5 9 7 4 2 0   5 1.46 1.85 70.0 -0.30 -0.22 9.8 85 3 5 8 9 3 3 0   6 1.54 1.69 70.6 -0.42 -0.27 11.2 85 4 4 8 10 3 3 0   7 1.47 1.71 74.0 -0.01 -0.25 8.8 86 1 6 7 9 3 4 0   8 1.47 1.72 73.8 -0.13 -0.16 9.9 87 4 5 9 9 3 2 0   9 1.47 1.71 75.3 -0.44 -0.09 10.8 85 5 4 12 10 4 2 0   10 2.85 2.85 77.7 -1.64 -0.38 26.2 84 8 6 4 4 1 1 0   11 1.20 1.19 93.1 -0.82 -0.23 11.9 83 6 4 12 11 5 4 0   12 1.14 1.29 152.3 -0.31 -0.04 11.2 77 12 5 8 14 12 2 0  HEM 2000 A 13 2.38 2.39 43.0 -0.47 -0.28 12.8 82 6 3 1 6 1 3 0   14 1.31 2.66 81.6 -1.35 -0.24 21.2 82 6 6 6 5 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.