spacer
spacer

PDBsum entry 1tgo

Go to PDB code: 
Top Page protein pores links
Pore analysis for: 1tgo calculated with MOLE 2.0 PDB id
1tgo
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.32 2.33 74.8 -2.02 -0.39 21.2 82 12 2 5 3 2 1 0  
2 1.20 2.99 88.4 -1.29 -0.22 17.3 84 11 3 5 7 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer