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PDBsum entry 1tdh

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Cleft analysis for: 1tdh PDB id
1tdh
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 4587.89 1.32 65.55 1 12.83 1 13.44 2 11 8 9 15 10 14 0 TRS 2000[A] (8 atoms)
2 3487.64 0.00 55.98 8 10.57 3 15.07 1 8 5 8 13 1 2 0  
3 702.42 0.00 53.00 9 7.92 5 7.28 5 6 2 2 3 0 1 0  
4 572.91 0.00 57.32 6 11.90 2 9.87 3 6 1 2 1 2 2 0  
5 398.67 0.00 60.83 3 9.40 4 8.66 4 0 1 4 2 0 5 0  
6 483.89 0.00 59.31 4 3.35 8 6.82 7 3 1 6 2 1 0 1  
7 599.91 0.00 56.69 7 5.26 7 5.62 9 2 2 2 5 1 6 1  
8 407.95 0.00 57.57 5 3.01 9 6.00 8 4 2 3 0 1 3 0  
9 472.50 0.00 52.16 10 5.55 6 7.15 6 2 1 0 3 1 3 0  
10 254.81 0.00 63.22 2 2.71 10 5.60 10 2 3 1 1 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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