PDBsum entry 1tau Go to PDB code:  Tunnel analysis for: 1tau calculated with MOLE 2.0 PDB id 1tau Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.56 36.3 -1.26 -0.40 14.9 89 4 2 4 4 1 0 0  DC 951 P DG 952 P DG 903 T DA 904 T 2 1.11 1.16 55.9 -1.74 -0.42 18.0 82 7 5 6 3 3 0 0  DC 951 P DG 952 P DG 901 T DG 903 T DA 904 T 3 1.10 1.14 60.2 -1.64 -0.41 17.1 77 7 3 5 2 3 0 0  DC 951 P DG 952 P DG 901 T DG 903 T DA 904 T 4 1.35 1.35 20.6 1.03 0.08 6.6 77 2 0 0 5 0 0 0   5 1.26 1.26 20.9 0.86 0.26 3.5 67 0 1 0 7 2 0 0   6 1.14 1.44 26.6 1.07 0.32 5.6 69 1 2 0 8 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.