PDBsum entry 1t3f Go to PDB code:  Tunnel analysis for: 1t3f calculated with MOLE 2.0 PDB id 1t3f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.18 16.1 -0.33 -0.36 2.5 64 0 0 2 0 5 1 0   2 1.44 1.58 16.0 -0.31 -0.60 2.2 99 0 0 4 1 1 0 0   3 1.54 1.87 19.6 -0.59 -0.65 2.1 103 0 0 8 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.