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PDBsum entry 1svd

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1svd calculated with MOLE 2.0 PDB id
1svd
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.35 6.6 -1.28 -0.17 30.1 87 2 2 0 2 1 0 0  
2 1.81 6.9 -1.05 -0.07 12.4 89 1 0 0 1 1 0 0  
3 2.29 7.5 -0.84 -0.62 10.8 93 1 1 0 1 0 0 0  
4 1.92 7.6 -1.34 -0.14 16.3 85 1 1 0 1 1 0 0  
5 2.04 9.1 -1.73 -0.72 21.3 78 1 2 1 1 0 0 0  
6 2.05 17.8 -2.17 -0.63 27.9 77 2 4 1 1 1 1 0  
7 2.13 4.0 -0.64 -0.85 3.1 100 0 0 2 0 0 0 0  
8 1.28 4.7 -1.04 0.92 7.6 63 0 1 0 1 2 0 0  
9 1.39 8.4 -1.86 0.31 16.1 68 1 1 0 2 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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