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PDBsum entry 1sv5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1sv5 calculated with MOLE 2.0 PDB id
1sv5
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.36 86.3 -1.32 -0.27 13.1 78 6 4 5 5 6 0 0  
2 1.27 1.28 108.8 -1.02 -0.27 13.1 82 9 3 8 10 4 3 0  
3 1.66 2.65 125.4 -1.49 -0.30 16.4 82 10 5 6 6 3 3 0  
4 1.28 1.25 141.7 -0.97 -0.21 12.9 75 8 5 8 8 6 2 0  
5 1.70 2.58 149.4 -1.40 -0.30 15.3 76 15 7 7 8 6 4 0  
6 1.34 1.32 151.7 -1.12 -0.22 13.5 79 12 5 10 12 5 6 0  
7 1.78 1.95 182.5 -1.66 -0.39 19.3 78 16 9 6 9 6 2 0  
8 1.30 1.31 208.8 -1.38 -0.30 17.2 76 18 9 9 14 8 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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