Literature references that cite this PDB file's
key reference
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PubMed id
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Reference
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C.D.Hardy,
and
P.K.Martin
(2008).
Biochemical characterization of DNA-binding proteins from Pyrobaculum aerophilum and Aeropyrum pernix.
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Extremophiles, 12,
235-246.
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L.Guo,
Y.Feng,
Z.Zhang,
H.Yao,
Y.Luo,
J.Wang,
and
L.Huang
(2008).
Biochemical and structural characterization of Cren7, a novel chromatin protein conserved among Crenarchaea.
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Nucleic Acids Res, 36,
1129-1137.
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PDB code:
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G.Renzone,
R.M.Vitale,
A.Scaloni,
M.Rossi,
P.Amodeo,
and
A.Guagliardi
(2007).
Structural characterization of the functional regions in the archaeal protein Sso7d.
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Proteins, 67,
189-197.
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R.Consonni,
I.Arosio,
T.Recca,
P.Fusi,
and
L.Zetta
(2007).
Structural determinants responsible for the thermostability of Sso7d and its single point mutants.
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Proteins, 67,
766-775.
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PDB code:
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A.Napoli,
A.Valenti,
V.Salerno,
M.Nadal,
F.Garnier,
M.Rossi,
and
M.Ciaramella
(2005).
Functional interaction of reverse gyrase with single-strand binding protein of the archaeon Sulfolobus.
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Nucleic Acids Res, 33,
564-576.
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J.Eichler,
and
M.W.Adams
(2005).
Posttranslational protein modification in Archaea.
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Microbiol Mol Biol Rev, 69,
393-425.
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A.Brehm,
K.R.Tufteland,
R.Aasland,
and
P.B.Becker
(2004).
The many colours of chromodomains.
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Bioessays, 26,
133-140.
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A.Merlino,
G.Graziano,
and
L.Mazzarella
(2004).
Structural and dynamic effects of alpha-helix deletion in Sso7d: implications for protein thermal stability.
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Proteins, 57,
692-701.
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H.Lou,
Z.Duan,
X.Huo,
and
L.Huang
(2004).
Modulation of hyperthermophilic DNA polymerase activity by archaeal chromatin proteins.
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J Biol Chem, 279,
127-132.
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Y.Wang,
D.E.Prosen,
L.Mei,
J.C.Sullivan,
M.Finney,
and
P.B.Vander Horn
(2004).
A novel strategy to engineer DNA polymerases for enhanced processivity and improved performance in vitro.
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Nucleic Acids Res, 32,
1197-1207.
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R.Guo,
H.Xue,
and
L.Huang
(2003).
Ssh10b, a conserved thermophilic archaeal protein, binds RNA in vivo.
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Mol Microbiol, 50,
1605-1615.
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A.Guagliardi,
L.Cerchia,
and
M.Rossi
(2002).
The Sso7d protein of Sulfolobus solfataricus: in vitro relationship among different activities.
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Archaea, 1,
87-93.
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A.Napoli,
Y.Zivanovic,
C.Bocs,
C.Buhler,
M.Rossi,
P.Forterre,
and
M.Ciaramella
(2002).
DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus.
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Nucleic Acids Res, 30,
2656-2662.
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H.Delbrück,
G.Ziegelin,
E.Lanka,
and
U.Heinemann
(2002).
An Src homology 3-like domain is responsible for dimerization of the repressor protein KorB encoded by the promiscuous IncP plasmid RP4.
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J Biol Chem, 277,
4191-4198.
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PDB codes:
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X.Chen,
R.Guo,
L.Huang,
and
R.Hong
(2002).
Evolutionary conservation and DNA binding properties of the Ssh7 proteins fromSulfolobus shibatae.
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Sci China C Life Sci, 45,
583-592.
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V.Agrawal,
and
R.K.Kishan
(2001).
Functional evolution of two subtly different (similar) folds.
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BMC Struct Biol, 1,
5.
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S.D'Auria,
P.Herman,
J.R.Lakowicz,
F.Tanfani,
E.Bertoli,
G.Manco,
and
M.Rossi
(2000).
The esterase from the thermophilic eubacterium Bacillus acidocaldarius: structural-functional relationship and comparison with the esterase from the hyperthermophilic archaeon Archaeoglobus fulgidus.
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Proteins, 40,
473-481.
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A.Napoli,
J.van der Oost,
C.W.Sensen,
R.L.Charlebois,
M.Rossi,
and
M.Ciaramella
(1999).
An Lrp-like protein of the hyperthermophilic archaeon Sulfolobus solfataricus which binds to its own promoter.
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J Bacteriol, 181,
1474-1480.
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P.Hindmarsh,
and
J.Leis
(1999).
Retroviral DNA integration.
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Microbiol Mol Biol Rev, 63,
836.
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F.Catanzano,
G.Graziano,
P.Fusi,
P.Tortora,
and
G.Barone
(1998).
Differential scanning calorimetry study of the thermodynamic stability of some mutants of Sso7d from Sulfolobus solfataricus.
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Biochemistry, 37,
10493-10498.
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P.Agback,
H.Baumann,
S.Knapp,
R.Ladenstein,
and
T.Härd
(1998).
Architecture of nonspecific protein-DNA interactions in the Sso7d-DNA complex.
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Nat Struct Biol, 5,
579-584.
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PDB code:
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P.López-García,
S.Knapp,
R.Ladenstein,
and
P.Forterre
(1998).
In vitro DNA binding of the archaeal protein Sso7d induces negative supercoiling at temperatures typical for thermophilic growth.
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Nucleic Acids Res, 26,
2322-2328.
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R.A.Lutzke,
and
R.H.Plasterk
(1998).
Structure-based mutational analysis of the C-terminal DNA-binding domain of human immunodeficiency virus type 1 integrase: critical residues for protein oligomerization and DNA binding.
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J Virol, 72,
4841-4848.
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S.Knapp,
P.T.Mattson,
P.Christova,
K.D.Berndt,
A.Karshikoff,
M.Vihinen,
C.I.Smith,
and
R.Ladenstein
(1998).
Thermal unfolding of small proteins with SH3 domain folding pattern.
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Proteins, 31,
309-319.
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E.Mombelli,
M.Afshar,
P.Fusi,
M.Mariani,
P.Tortora,
J.P.Connelly,
and
R.Lange
(1997).
The role of phenylalanine 31 in maintaining the conformational stability of ribonuclease P2 from Sulfolobus solfataricus under extreme conditions of temperature and pressure.
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Biochemistry, 36,
8733-8742.
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L.J.Ball,
N.V.Murzina,
R.W.Broadhurst,
A.R.Raine,
S.J.Archer,
F.J.Stott,
A.G.Murzin,
P.B.Singh,
P.J.Domaille,
and
E.D.Laue
(1997).
Structure of the chromatin binding (chromo) domain from mouse modifier protein 1.
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EMBO J, 16,
2473-2481.
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PDB code:
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T.Lazaridis,
I.Lee,
and
M.Karplus
(1997).
Dynamics and unfolding pathways of a hyperthermophilic and a mesophilic rubredoxin.
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Protein Sci, 6,
2589-2605.
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The most recent references are shown first.
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Where a reference describes a PDB structure, the PDB
code is
shown on the right.
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62 a.a.
