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PDBsum entry 1sqv

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Top Page protein ligands Protein-protein interface(s) links
Protein chain D PDB id
1sqv
Protein chain D highlighted
(click to view)
 
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
2 sheets
1 beta hairpin
3 strands
8 helices
24 helix-helix interacs
24 beta turns
6 gamma turns
Chain 446 a.a.
Chain 423 a.a.
Chain 378 a.a.
Chain 241 a.a.
Chain 196 a.a.
Chain 105 a.a.
Chain 75 a.a.
Chain 67 a.a.
Chain 57 a.a.
Chain 61 a.a.
Chain 51 a.a.
  
Residue conservation: Chain (241 residues)

UniProt code: P00125   [Pfam]

Sequence coloured by residue conservation:

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6
Conservation colouring:     Low 1 2 3 4 5 6 7 8 9 High
View:
Protein surface showing most poorly (1) and highly conserved (7 8 9) regions
ConSurf representation of conserved regions: 1 2 3 4 5 6 7 8 9
Download tab-separated text file of ConSurf analysis
Generate Raster3D image of surface coloured by conservation
ConSurf-DB ConSurf-DB data (including mult seq alignment) for 1sqv, chain D
Residue conservation calculated by ConSurf-DB.
  
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