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PDBsum entry 1smd

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Protein chain A PDB id
1smd
Protein chain A highlighted
(click to view)
 
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
7 sheets
5 beta alpha beta units
5 beta hairpins
3 beta bulges
22 strands
21 helices
11 helix-helix interacs
47 beta turns
5 gamma turns
5 disulphides
Catalytic residues
D197-D300-E233
D197-E233
D197-D236
  
Residue conservation: Chain (496 residues)

UniProt code: P04745   [Pfam]

Sequence coloured by residue conservation:

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Disulphides:   
    disulphide bond
CSA annotation:   
    catalytic residue
Residue contacts:   
    to metal
PDB SITE records:   
 AC1  AC2
Conservation colouring:     Low 1 2 3 4 5 6 7 8 9 High
View:
Protein surface showing most poorly (1) and highly conserved (7 8 9) regions
ConSurf representation of conserved regions: 1 2 3 4 5 6 7 8 9
Download tab-separated text file of ConSurf analysis
Generate Raster3D image of surface coloured by conservation
ConSurf-DB ConSurf-DB data (including mult seq alignment) for 1smd, chain A
Residue conservation calculated by ConSurf-DB.
  
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