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Ligand clusters for UniProt code P04745

Ligand clusters for P04745: Alpha-amylase 1 OS=Homo sapiens GN=AMY1A PE=1 SV=2

Top 6 (of 7) ligand clusters
Cluster 1.
8 ligand types
14 ligands
Cluster 2.
4 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
13 ligands
Representative protein: 1c8qA  
 

Structures

PDB   Schematic diagram
1c8qA    
3blkA    
3blpX    
3dhpA    
1smdA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: TAM × 1
Tris(hydroxyethyl)aminomethane
PDB code: 1q4n(X).


 
2. Ligand: GLC-AGL × 5
GLC=Alpha-D-Glucose, AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose.
PDB codes: 3blk(A), 3blp(X), 3dhp(A).


 
3. Ligand: HMC × 3
5-Hydroxymethyl-Chonduritol
PDB codes: 3blk(A), 3blp(X), 3dhp(A).


 
4. Ligand: GLC × 1
Alpha-D-Glucose
PDB code: 3dhp(A).


 
5. Ligand: GLC-AGL-HMC × 1
GLC=Alpha-D-Glucose, AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, HMC=5-Hydroxymethyl-Chonduritol.
PDB code: 1z32(X).


 
6. Ligand: HMC-AGL-GLC × 1
HMC=5-Hydroxymethyl-Chonduritol, AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1nm9(A).


 
7. Ligand: HMC-AGL-GLC-HMC-AGL-GLC × 1
HMC=5-Hydroxymethyl-Chonduritol, AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1mfv(A).


 
8. Ligand: HMC-AGL-GLC-HMC-AGL-GLC-GLC × 1
HMC=5-Hydroxymethyl-Chonduritol, AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1mfu(A).

 

 Cluster 2 contains 4 ligand types

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Ligand Description


 
1. Ligand: GLC × 1
Alpha-D-Glucose
PDB code: 1nm9(A).


 
2. Ligand: AGL-GLC × 1
AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1nm9(A).


 
3. Ligand: AGL-GLC-BGC × 1
AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1mfv(A).


 
4. Ligand: HMC-AGL-GLC-GLC × 1
HMC=5-Hydroxymethyl-Chonduritol, AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1mfu(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: HMC-AGL-GLC-GLC × 1
HMC=5-Hydroxymethyl-Chonduritol, AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose.
PDB code: 1mfu(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1mfu(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC × 1
Alpha-D-Glucose
PDB code: 1mfu(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 13
PDB codes: 1c8q(A), 1jxj(A), 1jxk(A), 1mfu(A), 1mfv(A), 1nm9(A), 1q4n(X), 1smd(A), 1xv8(A), 1z32(X), 3blk(A), 3blp(X), 3dhp(A).

 

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