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PDBsum entry 1sl6

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1sl6 calculated with MOLE 2.0 PDB id
1sl6
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.91 3.22 26.2 -2.56 -0.49 21.4 85 3 0 6 1 2 0 0  
2 1.45 1.56 30.3 -1.16 -0.28 13.6 72 2 1 2 2 1 2 0  
3 1.43 1.54 31.0 -0.53 -0.06 10.1 72 1 1 2 3 2 1 1  
4 1.80 1.80 44.8 -2.01 -0.30 26.4 78 6 2 3 2 3 0 0  
5 1.86 3.23 45.8 -2.45 -0.63 16.3 81 4 1 6 0 2 2 0  
6 1.77 1.99 54.7 -1.82 -0.36 23.1 78 8 2 3 3 3 1 0  
7 1.44 1.55 65.2 -1.90 -0.51 14.3 75 4 2 6 4 3 2 0  
8 1.61 1.73 73.4 -1.90 -0.44 13.1 76 5 2 7 4 4 1 0  
9 1.18 1.21 95.4 -2.18 -0.58 12.2 81 8 2 12 2 3 3 0  
10 1.43 1.55 125.6 -2.10 -0.33 20.6 80 9 6 10 5 3 3 0  
11 1.71 2.19 133.6 -2.29 -0.38 20.7 85 9 5 12 4 3 1 0  
12 1.60 1.72 133.8 -2.12 -0.31 20.0 79 10 6 11 6 4 2 0  
13 1.71 2.18 134.6 -2.03 -0.26 21.9 82 11 6 10 7 5 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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