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PDBsum entry 1sim

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Cleft analysis for: 1sim PDB id
1sim
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3888.00 2.60 67.05 3 9.90 2 13.40 1 10 7 23 17 5 8 2  
2 1493.44 0.00 75.73 1 12.98 1 10.71 2 7 3 8 9 5 4 0  
3 1522.55 0.00 63.05 5 7.25 5 9.59 5 6 6 8 10 4 1 0  
4 818.44 0.00 58.88 8 7.72 4 9.38 6 4 2 7 2 2 1 0  
5 475.03 0.00 55.21 9 6.15 7 9.71 4 4 2 1 1 1 1 0  
6 413.86 0.00 59.83 7 5.65 8 6.61 9 1 0 6 2 2 1 0  
7 332.02 0.00 52.50 10 4.72 9 6.75 8 2 2 0 0 1 2 0  
8 314.30 0.00 62.09 6 6.25 6 7.13 7 2 1 4 2 1 1 0  
9 368.30 0.00 63.97 4 9.12 3 9.97 3 2 3 6 1 0 1 0  
10 410.48 0.00 68.53 2 4.66 10 6.15 10 4 4 1 2 2 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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