PDBsum entry 1shh Go to PDB code:  Tunnel analysis for: 1shh calculated with MOLE 2.0 PDB id 1shh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.17 41.4 -0.87 -0.02 16.8 73 4 3 5 4 6 1 0   2 1.36 1.36 16.5 -0.58 -0.44 5.0 63 0 2 2 1 2 0 0   3 1.22 1.87 34.1 -0.87 -0.24 16.2 79 3 4 3 3 1 0 0   4 1.27 1.92 23.5 -0.09 0.07 11.7 80 3 1 1 6 3 0 0   5 1.30 1.86 25.3 0.06 0.05 10.4 82 3 1 1 6 2 1 0   6 1.42 1.46 26.5 -0.03 0.07 10.2 82 3 1 1 6 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.