PDBsum entry 1s9k Go to PDB code:  Tunnel analysis for: 1s9k calculated with MOLE 2.0 PDB id 1s9k Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.23 24.7 -2.00 -0.60 16.9 82 2 1 3 0 2 0 0  DA 4005 A DA 4006 A DT 5016 B DT 5017 B 2 1.17 1.28 33.6 -1.67 -0.46 17.0 83 4 1 3 0 2 0 0  DT 4001 A DT 4002 A DT 4003 A DT 5016 B DT 5017 B DA 5020 B 3 1.58 1.58 21.7 -2.29 -0.63 17.2 90 3 0 1 1 0 0 0  DT 4015 A DA 4016 A DA 4017 A DT 4018 A DT 5004 B DA 5005 B 4 1.67 1.67 23.8 -2.42 -0.55 20.8 89 4 0 1 1 0 0 0  DT 4015 A DA 4016 A DA 4017 A DT 4018 A DA 5002 B DC 5003 B DT 5004 B DA 5005 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.