 |
PDBsum entry 1s9c
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1s9c calculated with MOLE 2.0
|
PDB id
|
|
|
|
1s9c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
10 pores,
coloured by radius |
 |
10 pores,
coloured by radius
|
10 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.16 |
2.31 |
87.3 |
-0.67 |
-0.11 |
17.1 |
81 |
 |
5 |
4 |
4 |
6 |
2 |
1 |
0 |
 |
|
 |
 |
2 |
 |
2.47 |
2.63 |
166.3 |
-2.15 |
-0.66 |
23.1 |
84 |
23 |
19 |
26 |
5 |
5 |
1 |
0 |
|
 |
3 |
 |
2.17 |
2.50 |
28.2 |
0.29 |
0.30 |
12.3 |
79 |
2 |
1 |
2 |
6 |
2 |
1 |
0 |
|
 |
4 |
 |
2.76 |
2.96 |
28.9 |
0.02 |
0.19 |
18.0 |
77 |
4 |
2 |
1 |
5 |
3 |
0 |
0 |
|
 |
5 |
 |
1.90 |
1.97 |
56.4 |
-2.09 |
-0.54 |
26.9 |
80 |
5 |
7 |
4 |
2 |
3 |
2 |
0 |
|
 |
6 |
 |
1.98 |
2.03 |
39.4 |
-0.35 |
-0.11 |
14.8 |
69 |
3 |
1 |
1 |
5 |
4 |
1 |
0 |
|
 |
7 |
 |
1.75 |
2.91 |
44.2 |
0.02 |
0.08 |
9.0 |
73 |
3 |
3 |
1 |
9 |
4 |
0 |
0 |
|
 |
8 |
 |
1.60 |
3.39 |
65.2 |
-0.36 |
0.01 |
16.8 |
72 |
5 |
3 |
1 |
8 |
6 |
1 |
0 |
|
 |
9 |
 |
1.27 |
1.47 |
60.0 |
-0.52 |
0.08 |
17.3 |
74 |
4 |
4 |
1 |
9 |
5 |
0 |
0 |
|
 |
10 |
 |
2.74 |
2.84 |
27.3 |
0.02 |
0.06 |
13.8 |
79 |
4 |
1 |
1 |
5 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |