PDBsum entry 1s97 Go to PDB code:  Tunnel analysis for: 1s97 calculated with MOLE 2.0 PDB id 1s97 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   18 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.07 2.09 21.1 1.70 0.63 9.3 89 2 0 0 5 0 0 0  DA 10 H DC 11 H DG 13 H DA 4 L DT 6 L DA 7 L 2 2.13 2.17 26.7 -1.14 0.00 27.5 90 4 0 1 2 0 0 0  DG 4 H DG 8 H DA 7 L DG 8 L DT 9 L DC 10 L DC 11 L 3 1.45 1.64 28.8 0.60 0.04 12.0 94 1 1 0 3 0 0 0  DG 8 H DG 9 H DA 10 H DA 7 L DG 8 L DT 9 L 4 1.13 1.28 21.1 0.00 0.11 19.8 79 2 3 2 6 1 0 0   5 1.14 1.31 25.4 -0.28 0.09 16.0 70 4 3 0 5 3 1 0   6 1.86 1.86 23.2 1.87 0.73 8.1 92 2 0 1 6 0 0 0  DC 11 E DT 12 E DG 13 E DA 4 I DT 6 I DA 7 I 7 1.85 1.86 25.5 -1.25 0.00 28.1 90 4 0 1 2 0 0 0  DG 5 E DG 8 E DG 9 E DA 7 I DG 8 I DT 9 I DC 10 I DC 11 I 8 1.34 1.34 23.3 1.68 0.80 12.7 92 2 0 1 6 0 0 0  DG 13 F DA 4 J DT 6 J DA 7 J 9 1.34 1.34 28.6 -1.49 -0.19 26.8 94 4 0 2 2 0 0 0  DG 4 F DG 5 F DA 7 J DG 8 J DT 9 J DC 10 J DC 11 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.