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PDBsum entry 1s26

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1s26 calculated with MOLE 2.0 PDB id
1s26
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.58 38.6 -0.91 0.24 15.9 67 4 2 2 3 3 0 0  
2 3.50 3.87 48.2 -0.65 -0.18 16.9 85 7 3 3 6 0 0 0  
3 2.98 3.50 49.6 -2.18 -0.48 30.9 78 7 8 1 4 1 1 0  
4 2.66 3.98 51.8 -2.59 -0.58 28.4 80 5 8 3 0 2 1 0  
5 2.29 2.29 64.5 -2.22 -0.40 28.3 79 10 9 3 1 1 2 0  APC 3139 C
6 2.46 2.54 70.2 -1.15 -0.32 21.6 83 10 7 3 6 1 0 0  
7 2.30 2.30 76.3 -2.07 -0.58 23.8 81 9 9 3 2 0 2 0  APC 3139 C
8 1.61 2.15 77.5 -2.25 -0.59 26.6 78 13 11 5 4 1 1 0  APC 2139 B
9 2.85 3.28 79.9 -1.98 -0.52 28.3 78 11 11 3 6 1 1 0  
10 1.60 2.20 79.5 -2.14 -0.60 25.6 80 12 12 5 5 2 0 0  APC 2139 B
11 2.57 4.89 81.1 -1.83 -0.49 27.2 78 11 12 2 8 2 0 0  
12 2.87 2.92 86.8 -2.02 -0.58 26.1 79 11 11 4 6 1 1 0  
13 2.30 2.30 88.4 -2.19 -0.57 27.7 80 8 11 3 1 2 1 0  APC 3139 C
14 2.29 2.29 91.9 -2.08 -0.58 24.8 80 10 13 5 3 1 3 0  APC 3139 C
15 2.63 6.26 103.5 -2.29 -0.56 31.2 75 15 12 2 5 1 2 0  APC 3139 C
16 1.24 1.60 108.9 -1.07 -0.22 15.7 74 7 6 5 6 7 1 0  
17 2.67 3.99 107.7 -2.30 -0.56 29.5 76 12 13 2 5 1 2 0  
18 1.61 2.20 110.0 -2.40 -0.66 25.2 80 11 16 7 1 2 3 0  
19 2.66 3.98 124.2 -2.22 -0.56 26.4 78 10 13 5 4 2 2 0  
20 1.17 1.21 127.8 -1.26 -0.29 17.0 86 6 8 11 7 3 2 0  
21 1.31 1.33 133.9 -1.13 -0.37 18.2 84 10 13 7 10 1 2 0  
22 3.08 3.31 133.6 -2.45 -0.62 30.2 77 18 18 3 4 1 4 0  APC 2139 B
23 1.21 1.24 144.0 -1.27 -0.33 18.7 82 13 9 11 11 4 2 0  APC 2139 B
24 2.36 2.37 145.8 -2.25 -0.65 25.0 80 16 15 5 2 0 5 0  APC 1139 A APC 3139 C
25 1.25 1.29 156.3 -1.18 -0.33 20.9 81 12 14 5 13 1 2 0  
26 1.21 1.26 155.3 -1.24 -0.31 20.0 81 10 13 6 11 3 1 0  
27 1.90 3.09 171.5 -2.58 -0.64 28.7 79 19 19 11 5 2 4 0  
28 1.30 1.64 175.8 -1.32 -0.28 18.9 74 11 11 7 10 7 2 0  
29 1.33 1.57 184.7 -1.40 -0.27 20.9 73 15 12 6 13 7 2 0  
30 2.04 2.04 209.0 -1.76 -0.49 25.1 77 20 19 4 8 5 2 0  APC 2139 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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