PDBsum entry 1s0m Go to PDB code:  Tunnel analysis for: 1s0m calculated with MOLE 2.0 PDB id 1s0m Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.29 2.29 18.5 -2.66 -0.31 37.0 88 4 0 1 1 0 0 0  DG 1805 C DA 1806 C DG 1809 C DT 1909 D DC 1910 D DC 1911 D 2 1.13 1.13 19.6 -0.30 -0.13 14.3 99 1 1 1 1 0 0 0  DG 1808 C DG 1809 C DA 1810 C DT 1811 C DT 1909 D 3 1.11 1.12 20.1 -2.41 -0.44 31.2 93 3 0 2 0 0 0 0  DG 1805 C DA 1806 C DG 1808 C DG 1809 C DC 1910 D DC 1911 D 4 2.13 2.22 25.9 1.47 0.76 13.4 92 3 0 1 6 0 0 0  DT 1812 C DT 1813 C DT 1905 D DA 1906 D DA 1907 D DA 1908 D DT 1909 D BAP 1920 D 5 1.13 1.13 49.6 -0.90 -0.10 20.9 88 6 2 2 5 0 0 0  CA 406 A DTP 803 A DG 1808 C DG 1809 C DT 1813 C DA 1904 D DT 1905 D DA 1906 D DA 1907 D DA 1908 D DT 1909 D BAP 1920 D 6 1.17 1.17 73.0 -0.74 -0.06 17.4 90 8 2 5 7 1 0 0  DTP 803 A DG 1808 C DG 1809 C DT 1813 C DA 1904 D DT 1905 D DA 1906 D DA 1907 D DA 1908 D DT 1909 D BAP 1920 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.