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PDBsum entry 1rzt

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Top Page protein dna_rna ligands metals Protein-protein interface(s) links
Protein chain A    -    representing identical chains: E I M PDB id
1rzt
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
4 sheets
4 beta hairpins
5 beta bulges
11 strands
18 helices
25 helix-helix interacs
17 beta turns
1 gamma turn
1 disulphide
Catalytic residues
D490
  
Chain & (327 residues)

UniProt code: Q9UGP5 (DPOLL_HUMAN)   [Pfam]

structural classification (4 domains) :
Domain Links CATH no.   Class Architecture
1 1.10.150.110 = Mainly Alpha Orthogonal Bundle
2 1.10.150.20 = Mainly Alpha Orthogonal Bundle
3 3.30.460.10 = Alpha Beta 2-Layer Sandwich
4 3.30.210.10 = Alpha Beta 2-Layer Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Disulphides:   
    disulphide bond     disulphide bond to other chain
CSA annotation:   
    catalytic residue
Residue contacts:   
    to DNA/RNA     to metal
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9  BC1
 BC2

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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