spacer
spacer

PDBsum entry 1rze

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 1rze calculated with MOLE 2.0 PDB id
1rze
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.42 7.1 -1.34 -0.26 15.8 69 2 1 1 2 1 0 0  
2 1.60 9.0 -1.76 -0.71 10.7 75 3 0 2 0 0 1 0  
3 1.30 7.8 3.86 1.14 0.1 62 0 0 0 5 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer