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PDBsum entry 1rzd

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Cleft analysis for: 1rzd PDB id
1rzd
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2270.95 2.28 64.30 3 11.51 1 12.46 1 10 4 7 4 5 9 0  
2 996.47 0.00 71.54 1 9.70 2 8.08 5 6 3 6 9 4 2 0 SO4 500[A] (4 atoms)
3 776.67 0.00 65.30 2 7.85 6 6.71 7 4 3 5 3 2 4 0  
4 819.28 0.00 60.63 6 8.25 5 9.80 2 6 3 6 6 1 2 0  
5 494.44 0.00 57.92 9 6.04 8 9.21 3 4 0 1 3 3 0 0  
6 538.31 0.00 53.30 10 8.42 4 8.17 4 2 2 2 3 0 4 0  
7 359.86 0.00 64.27 4 9.31 3 7.56 6 2 2 5 1 1 0 0  
8 332.02 0.00 64.11 5 6.20 7 6.11 8 1 3 2 3 2 2 0  
9 324.84 0.00 60.50 7 4.86 9 5.90 9 1 2 1 3 1 1 0  
10 296.58 0.00 59.16 8 1.89 10 5.48 10 2 4 4 0 0 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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