PDBsum entry 1ryr Go to PDB code:  Pore analysis for: 1ryr calculated with MOLE 2.0 PDB id 1ryr Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.07 3.07 29.2 -1.35 -0.48 15.1 81 4 2 1 2 3 0 0  CA 404 A ATP 1814 A DC 1813 B DT 1903 C DG 1906 C DA 1907 C DA 1908 C DT 1909 C DC 1910 C DC 1911 C 2 1.79 2.97 30.6 -1.71 -0.27 21.2 88 6 2 3 2 1 0 0  CA 404 A ATP 1814 A DC 1813 B DT 1903 C DA 1908 C 3 2.26 2.28 31.2 -0.37 0.18 22.1 94 4 0 2 2 0 0 0  DA 1807 B DG 1808 B DG 1809 B DA 1810 B DT 1811 B DT 1904 C DT 1905 C DG 1906 C DA 1907 C DA 1908 C DT 1909 C DC 1910 C DC 1911 C DT 1913 C DC 1914 C DC 1915 C DC 1916 C 4 1.60 1.76 40.4 -2.10 -0.35 26.8 81 6 3 2 2 2 1 0  CA 404 A ATP 1814 A DC 1813 B DA 1908 C 5 1.51 1.51 44.3 -1.12 -0.60 12.7 87 6 1 2 2 1 0 0  CA 404 A ATP 1814 A DA 1807 B DG 1808 B DG 1809 B DA 1810 B DT 1811 B DT 1812 B DC 1813 B DT 1903 C DG 1906 C DA 1907 C DA 1908 C DT 1909 C DC 1910 C DC 1911 C DT 1912 C DT 1913 C DC 1914 C DC 1915 C DC 1916 C 6 1.51 1.51 45.4 -1.59 -0.57 16.9 86 6 1 3 1 1 0 0  DA 1807 B DG 1808 B DG 1809 B DA 1810 B DT 1811 B DT 1812 B DC 1813 B DG 1906 C DA 1907 C DA 1908 C DT 1909 C DC 1910 C DC 1911 C DT 1912 C DT 1913 C DC 1914 C DC 1915 C DC 1916 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.