PDBsum entry 1rts Go to PDB code:  Tunnel analysis for: 1rts calculated with MOLE 2.0 PDB id 1rts Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.61 3.30 27.6 -0.33 0.32 9.7 66 1 1 3 5 4 0 1  UMP 408 B D16 409 B 2 1.68 3.18 23.2 -0.34 0.37 10.9 70 1 1 3 5 5 0 0  UMP 308 A D16 309 A 3 1.68 3.22 25.2 -0.72 0.29 14.2 70 2 2 3 5 5 0 1  UMP 308 A D16 309 A 4 1.15 1.81 18.7 0.08 0.10 4.7 76 1 1 3 2 2 1 0   5 1.16 1.81 20.3 0.01 0.07 6.9 74 0 1 2 2 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.