PDBsum entry 1rt3 Go to PDB code:  Pore analysis for: 1rt3 calculated with MOLE 2.0 PDB id 1rt3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.64 26.5 0.07 0.37 12.0 69 4 1 0 4 3 3 0  U05 999 A 2 1.23 1.27 58.3 0.24 0.37 3.2 68 1 1 3 9 6 4 0   3 1.36 1.62 150.3 -1.38 -0.21 21.1 72 11 7 4 8 7 6 0  U05 999 A 4 1.23 1.32 160.0 -0.66 0.02 8.9 68 5 4 6 9 13 7 1  U05 999 A 5 1.22 1.29 195.8 -1.30 -0.07 18.2 72 13 9 3 7 8 4 1   6 1.27 3.66 201.6 -1.65 -0.19 17.5 78 16 9 9 10 10 6 0   7 1.23 1.22 200.4 -1.66 -0.18 21.0 74 14 10 5 6 7 4 0   8 1.21 3.77 228.7 -1.82 -0.26 20.4 76 19 11 8 11 11 7 0   9 1.24 2.22 228.0 -1.77 -0.26 21.7 76 13 13 8 6 9 3 0   10 1.17 2.11 237.9 -1.94 -0.27 24.4 75 17 14 5 7 9 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.