PDBsum entry 1rt1 Go to PDB code:  Pore analysis for: 1rt1 calculated with MOLE 2.0 PDB id 1rt1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.16 2.27 25.4 -1.64 -0.60 14.6 80 3 1 3 0 1 2 0   2 1.88 3.08 46.6 -1.57 -0.16 21.9 80 7 1 3 5 1 0 0  CSD 280 A 3 2.35 2.57 68.9 -0.54 0.13 15.0 74 4 4 2 7 4 1 0   4 1.44 1.55 77.1 -1.28 -0.37 14.3 76 6 3 5 5 3 3 0   5 2.10 4.35 97.5 -1.86 -0.57 19.0 81 6 5 4 4 0 1 0   6 1.92 3.05 115.2 -2.05 -0.37 23.3 84 10 3 8 6 1 0 0  CSD 280 A 7 2.00 2.11 126.1 -1.63 -0.35 18.1 76 12 8 4 4 4 3 0   8 1.98 3.18 127.1 -1.37 -0.22 19.3 80 9 7 2 6 4 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.