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PDBsum entry 1rrp

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1rrp calculated with MOLE 2.0 PDB id
1rrp
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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15 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.62 14.8 -0.52 -0.25 7.9 73 2 1 1 3 2 3 0  
2 1.62 16.6 0.67 0.19 4.8 71 2 0 0 3 2 2 0  
3 1.54 28.8 -0.76 -0.11 13.4 73 3 2 0 3 2 3 0  
4 1.61 29.9 -0.76 -0.17 14.4 74 3 3 0 4 2 2 0  
5 3.31 4.6 -1.49 -0.55 16.0 60 1 0 0 0 1 1 0  
6 2.24 7.9 0.25 -0.22 6.6 84 1 0 0 2 0 1 0  
7 1.88 5.2 -1.97 -0.22 28.3 68 2 0 0 0 1 1 0  
8 1.39 14.8 -0.19 0.06 8.7 86 1 1 4 4 1 0 0  
9 2.42 9.4 -1.68 -0.24 25.4 77 3 2 0 2 1 1 0  
10 1.48 10.9 -1.61 -0.30 26.4 79 3 2 0 2 1 0 0  
11 2.03 4.8 -0.10 -0.57 2.6 90 0 0 0 2 0 1 0  
12 1.90 11.0 0.42 0.13 5.4 77 1 1 1 3 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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