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PDBsum entry 1rp9

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Cleft analysis for: 1rp9 PDB id
1rp9
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2180.25 3.19 62.75 4 10.03 1 8.97 1 5 8 5 11 7 5 0 DAF 2000[A], GLC 2001[A], GLC 
2002[A] (25 atoms)
2 683.02 0.00 67.90 2 7.35 5 6.08 8 2 2 3 4 4 3 0 DAF 3000[A], GLC 3001[A] (30 atoms)
3 751.78 0.00 66.03 3 7.58 4 6.89 4 3 3 7 3 5 2 0  
4 618.47 0.00 60.40 6 9.55 2 8.21 2 2 0 3 6 1 4 0 BGC 4001[A] (2 atoms)
5 638.72 0.00 61.54 5 8.46 3 6.59 5 3 1 0 5 3 2 1 DAF 2000[A] (3 atoms)
6 744.61 0.00 60.36 7 5.93 7 5.66 9 3 1 6 10 1 2 0  
7 334.55 0.00 52.51 10 2.39 10 6.24 7 3 0 1 4 0 2 0  
8 556.45 0.00 68.27 1 6.07 6 7.01 3 1 5 5 4 2 5 0  
9 388.97 0.00 58.40 8 4.36 9 6.43 6 2 3 2 3 2 1 0  
10 345.94 0.00 56.97 9 4.73 8 5.06 10 2 2 5 1 2 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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