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PDBsum entry 1rj6

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1rj6 PDB id
1rj6
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 14048.86 12.52 68.09 1 14.13 1 23.35 1 25 24 59 37 19 24 0 AZM 400[A], AZM 401[B] (25 atoms)
2 1121.77 0.00 63.80 7 10.81 2 8.07 4 3 4 6 4 2 3 0  
3 1028.95 0.00 58.56 8 5.23 10 7.40 6 3 4 6 7 3 0 0  
4 559.41 0.00 54.89 10 5.31 8 7.56 5 1 2 4 3 0 4 0  
5 575.86 0.00 55.43 9 7.24 7 7.31 8 1 2 4 3 0 4 0  
6 471.23 0.00 64.35 5 5.30 9 7.35 7 1 3 4 1 0 5 1  
7 574.59 0.00 67.17 2 7.71 5 6.72 10 2 2 3 5 2 3 0 NAG 901[B] (5 atoms)
8 569.11 0.00 66.11 4 9.56 3 11.54 2 2 2 3 4 2 3 0 NAG 801[A] (6 atoms)
9 507.09 0.00 64.31 6 7.51 6 8.48 3 2 2 5 2 1 2 0  
10 499.08 0.00 66.17 3 8.60 4 7.28 9 2 2 5 2 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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