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PDBsum entry 1rj5

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1rj5 calculated with MOLE 2.0 PDB id
1rj5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.72 20.0 -1.52 -0.36 10.2 89 2 1 5 2 1 0 0  
2 1.63 24.8 -1.27 -0.41 10.6 93 2 1 7 3 1 0 0  
3 1.64 32.1 -2.13 -0.42 19.2 86 5 2 6 0 2 0 0  
4 1.64 33.0 -1.56 -0.56 9.8 84 3 2 8 3 2 2 0  
5 1.64 34.5 -1.31 -0.09 16.2 86 4 1 5 1 4 0 0  
6 1.76 35.1 -1.20 -0.51 7.7 84 3 1 8 3 2 2 0  
7 2.34 6.7 0.38 0.36 13.5 83 2 0 1 3 1 0 0  701 ACY A
8 1.26 11.4 -1.21 -0.43 16.2 70 1 1 1 0 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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