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PDBsum entry 1rba

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 1rba calculated with MOLE 2.0 PDB id
1rba
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.34 4.4 -2.08 -0.60 15.8 82 2 1 2 0 1 0 0  
2 1.58 5.4 1.84 0.68 8.5 67 1 0 0 5 1 0 0  
3 1.47 11.9 1.61 0.61 9.8 69 2 0 0 4 1 0 0  
4 1.66 4.3 -1.53 -0.50 12.9 82 1 2 2 0 1 0 0  
5 1.48 7.6 1.22 0.14 1.5 76 0 0 0 5 1 1 0  
6 1.33 7.7 -2.25 -0.49 38.3 78 2 2 0 2 0 0 0  
7 1.53 11.0 -2.46 -0.59 37.9 80 3 2 0 2 0 0 0  
8 1.67 5.3 -1.29 0.34 31.7 77 3 0 0 1 1 1 0  
9 1.37 11.7 -0.85 0.34 29.8 77 4 1 0 1 1 0 0  
10 2.64 4.0 1.59 0.30 1.7 74 0 0 0 1 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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