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PDBsum entry 1r9t
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Pore analysis for: 1r9t calculated with  MOLE 2.0
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PDB id
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1r9t
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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24 pores,
coloured by radius |
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29 pores,
coloured by radius
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29 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.05 |
2.25 |
68.7 |
-1.77 |
-0.27 |
25.2 |
84 |
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8 |
4 |
3 |
6 |
2 |
1 |
0 |
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2 |
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2.43 |
2.68 |
74.8 |
-1.99 |
-0.43 |
23.0 |
79 |
9 |
5 |
5 |
4 |
3 |
1 |
0 |
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3 |
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2.58 |
5.05 |
77.9 |
-2.47 |
-0.60 |
24.3 |
85 |
11 |
3 |
8 |
1 |
2 |
1 |
0 |
A 1 R DC 25 T DG 26 T DA 27 T
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4 |
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1.30 |
2.55 |
93.1 |
-1.90 |
-0.61 |
25.1 |
87 |
10 |
9 |
6 |
5 |
0 |
0 |
0 |
DC 1 N DC 9 N DG 10 N DA 10 T
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5 |
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1.70 |
1.99 |
94.4 |
-2.47 |
-0.63 |
24.7 |
81 |
12 |
5 |
6 |
1 |
3 |
1 |
0 |
DT 28 T
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6 |
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1.95 |
2.07 |
106.2 |
-1.93 |
-0.55 |
20.0 |
88 |
10 |
7 |
10 |
6 |
1 |
1 |
0 |
DC 1 N DC 9 N DG 10 N DA 10 T
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7 |
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3.53 |
3.89 |
107.9 |
-1.43 |
-0.53 |
18.1 |
91 |
15 |
7 |
14 |
4 |
0 |
1 |
0 |
ATP 1308 B DC 9 N DG 10 N DA 10 T
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8 |
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1.17 |
1.29 |
114.0 |
-1.76 |
-0.30 |
27.0 |
86 |
13 |
7 |
4 |
8 |
1 |
3 |
1 |
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9 |
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2.18 |
2.46 |
114.9 |
-2.68 |
-0.54 |
29.5 |
81 |
15 |
9 |
9 |
2 |
2 |
1 |
0 |
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10 |
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1.79 |
1.95 |
121.9 |
-1.98 |
-0.46 |
23.9 |
84 |
11 |
9 |
9 |
6 |
2 |
0 |
0 |
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11 |
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2.03 |
2.26 |
127.0 |
-2.18 |
-0.50 |
22.5 |
84 |
12 |
5 |
9 |
8 |
1 |
2 |
0 |
A 1 R DC 25 T DG 26 T DA 27 T
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12 |
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1.29 |
2.56 |
130.2 |
-1.82 |
-0.44 |
26.1 |
80 |
14 |
14 |
6 |
9 |
3 |
1 |
0 |
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13 |
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1.93 |
2.11 |
138.7 |
-1.90 |
-0.46 |
22.0 |
79 |
14 |
12 |
7 |
7 |
4 |
3 |
0 |
DC 1 N DC 16 T DG 17 T
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14 |
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1.92 |
2.12 |
145.7 |
-2.30 |
-0.61 |
26.4 |
83 |
13 |
11 |
7 |
3 |
2 |
3 |
0 |
A 1 R C 3 R G 4 R A 5 R G 6 R DG 17 T DC 23 T DT
24 T DG 26 T
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15 |
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2.44 |
3.84 |
143.6 |
-2.25 |
-0.64 |
26.9 |
86 |
15 |
9 |
6 |
3 |
0 |
1 |
0 |
DC 1 N DC 9 N DG 10 N A 1 R C 3 R G 4 R A 5 R G 6
R DA 10 T DC 16 T DG 17 T DC 23 T DT 24 T DG 26 T
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16 |
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3.30 |
5.13 |
147.7 |
-1.89 |
-0.47 |
23.2 |
87 |
16 |
7 |
11 |
6 |
2 |
0 |
0 |
DC 1 N DC 9 N DG 10 N DA 10 T DT 28 T
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17 |
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2.18 |
3.48 |
155.5 |
-1.64 |
-0.34 |
21.5 |
86 |
20 |
9 |
11 |
10 |
4 |
1 |
0 |
DC 4 N DT 5 N DC 9 N DG 10 N DT 8 T DA 9 T DA 10
T DG 11 T
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18 |
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1.31 |
2.66 |
160.6 |
-1.85 |
-0.49 |
25.3 |
84 |
22 |
14 |
16 |
7 |
2 |
2 |
0 |
ATP 1308 B
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19 |
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2.84 |
3.72 |
163.8 |
-2.01 |
-0.47 |
26.0 |
80 |
18 |
13 |
7 |
7 |
3 |
2 |
0 |
DC 1 N A 1 R C 3 R G 4 R A 5 R G 6 R DC 16 T DG
17 T DC 23 T DT 24 T DG 26 T
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20 |
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3.01 |
4.26 |
163.7 |
-2.01 |
-0.53 |
23.5 |
81 |
16 |
12 |
10 |
6 |
3 |
1 |
0 |
DC 1 N A 1 R C 3 R G 4 R A 5 R G 6 R DC 16 T DG
17 T DC 23 T DT 24 T DC 25 T DG 26 T DA 27 T
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21 |
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1.34 |
2.60 |
167.8 |
-2.24 |
-0.58 |
31.0 |
83 |
17 |
13 |
4 |
6 |
0 |
1 |
0 |
DC 1 N A 1 R C 3 R G 4 R A 5 R G 6 R DC 16 T DG
17 T DC 23 T DT 24 T DG 26 T
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22 |
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1.92 |
3.68 |
169.0 |
-1.99 |
-0.53 |
22.4 |
83 |
22 |
13 |
18 |
5 |
3 |
4 |
0 |
ATP 1308 B DC 1 N DC 16 T DG 17 T
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23 |
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2.00 |
2.26 |
177.9 |
-2.16 |
-0.51 |
23.4 |
82 |
15 |
9 |
8 |
10 |
2 |
4 |
0 |
A 1 R C 3 R G 4 R A 5 R G 6 R DG 17 T DC 23 T DT
24 T DG 26 T
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24 |
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2.62 |
5.13 |
175.4 |
-1.79 |
-0.54 |
21.9 |
85 |
20 |
8 |
16 |
4 |
2 |
2 |
0 |
ATP 1308 B DC 1 N A 1 R C 3 R G 4 R A 5 R G 6 R
DC 16 T DG 17 T DC 23 T DT 24 T DC 25 T DG 26 T D
A 27 T
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25 |
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1.29 |
2.59 |
177.9 |
-1.99 |
-0.42 |
27.4 |
83 |
20 |
10 |
8 |
9 |
4 |
0 |
0 |
DC 1 N DT 28 T
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26 |
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1.31 |
3.55 |
197.2 |
-0.92 |
-0.11 |
21.9 |
83 |
20 |
8 |
6 |
16 |
4 |
0 |
0 |
DC 1 N
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27 |
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1.30 |
2.72 |
217.7 |
-1.80 |
-0.43 |
26.6 |
82 |
25 |
15 |
8 |
13 |
3 |
3 |
3 |
DC 1 N DC 4 N DT 5 N DT 8 T DA 9 T DA 10 T DG 11 T
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28 |
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1.38 |
1.92 |
230.7 |
-1.82 |
-0.41 |
23.7 |
84 |
26 |
13 |
12 |
14 |
4 |
4 |
2 |
DC 1 N DC 4 N DT 5 N DT 8 T DA 9 T DA 10 T DG 11 T
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29 |
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1.64 |
1.71 |
232.5 |
-1.53 |
-0.42 |
22.2 |
85 |
30 |
13 |
16 |
12 |
3 |
4 |
3 |
ATP 1308 B DC 4 N DT 5 N DT 8 T DA 9 T DA 10 T DG
11 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program