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PDBsum entry 1r4o

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Top Page protein dna_rna metals Protein-protein interface(s) links
Transcription/DNA PDB id
1r4o
Contents
Protein chains
80 a.a. *
DNA/RNA
Metals
_ZN ×4
Waters ×109
* Residue conservation analysis

References listed in PDB file
Key reference
Title Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA.
Authors B.F.Luisi, W.X.Xu, Z.Otwinowski, L.P.Freedman, K.R.Yamamoto, P.B.Sigler.
Ref. Nature, 1991, 352, 497-505.
PubMed id 1865905
Abstract
Two crystal structures of the glucocorticoid receptor DNA-binding domain complexed with DNA are reported. The domain has a globular fold which contains two Zn-nucleated substructures of distinct conformation and function. When it binds DNA, the domain dimerizes, placing the subunits in adjacent major grooves. In one complex, the DNA has the symmetrical consensus target sequence; in the second, the central spacing between the target's half-sites is larger by one base pair. This results in one subunit interacting specifically with the consensus target half-site and the other nonspecifically with a noncognate element. The DNA-induced dimer fixes the separation of the subunits' recognition surfaces so that the spacing between the half-sites becomes a critical feature of the target sequence's identity.
Secondary reference #1
Title The basis for half-Site specificity explored through a non-Cognate steroid receptor-Dna complex.
Authors D.T.Gewirth, P.B.Sigler.
Ref. Nat Struct Biol, 1995, 2, 386-394.
PubMed id 7664096
Abstract
PROCHECK
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 Headers

 

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