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PDBsum entry 1r2c

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Pore analysis for: 1r2c calculated with MOLE 2.0 PDB id
1r2c
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.73 2.33 25.5 -0.56 -0.33 14.3 70 1 2 0 3 0 2 0  SO4 801 H LDA 705 L
2 1.62 2.46 27.8 -1.01 -0.14 22.4 84 4 4 1 4 2 0 0  
3 1.51 1.73 34.3 0.59 0.50 12.1 80 5 0 2 9 2 0 1  HEM 1203 C HEM 1204 C
4 1.38 1.71 44.3 -0.01 0.09 11.1 82 5 1 4 5 5 0 0  HEM 1203 C BCB 302 L BCB 1301 M BCB 1303 M
5 1.36 3.46 53.4 1.02 0.53 7.6 82 6 0 0 16 3 1 3  HEM 1201 C HEM 1202 C HEM 1204 C
6 1.51 1.73 63.3 1.41 0.66 6.8 80 6 0 0 21 4 0 4  HEM 1201 C HEM 1202 C HEM 1203 C HEM 1204 C
7 1.48 1.71 69.9 0.60 0.32 9.6 81 7 1 4 13 7 0 1  HEM 1203 C HEM 1204 C BCB 302 L BCB 1301 M BCB
1303 M
8 1.23 1.59 82.2 -0.40 -0.12 18.1 81 7 6 3 16 3 3 0  UQ2 502 L BPB 401 M BCB 1301 M
9 1.32 1.71 128.4 -0.12 0.13 12.5 77 10 3 5 19 16 2 0  HEM 1203 C BCB 302 L BCB 304 L BPB 402 L LDA 705
L MQ7 501 M LDA 701 M BCB 1303 M
10 1.26 1.37 150.9 0.25 0.27 10.5 79 14 4 4 25 10 3 4  HEM 1202 C HEM 1203 C HEM 1204 C BCB 302 L BPB
401 M NS5 600 M LDA 706 M BCB 1301 M BCB 1303 M

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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