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PDBsum entry 1r0x

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1r0x calculated with MOLE 2.0 PDB id
1r0x
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 2.57 30.5 -0.68 -0.04 18.2 83 5 2 4 4 3 0 0  
2 1.80 2.14 23.4 -1.96 -0.26 25.8 81 3 2 1 3 2 0 0  
3 1.80 2.14 26.7 -0.97 0.01 18.0 78 4 0 2 4 3 0 0  
4 1.84 2.14 28.5 -1.08 0.03 17.8 77 6 0 2 4 3 0 0  
5 1.83 2.14 30.2 -2.13 -0.47 28.9 85 3 4 2 3 1 0 0  
6 1.63 1.83 31.3 -2.03 -0.44 28.5 84 5 4 2 4 1 0 0  
7 1.85 2.14 33.4 -1.15 -0.12 17.8 81 4 1 2 4 2 0 0  
8 1.34 4.15 19.0 3.22 1.20 3.5 85 0 2 0 8 1 0 0  
9 1.20 1.65 16.1 -2.33 -0.40 37.0 72 2 3 1 0 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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