PDBsum entry 1qxe

Pore analysis for: 1qxe calculated with

MOLE 2.0

PDB id

1qxe

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

3 pores, coloured by radius

11 pores, coloured by radius

11 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.21

2.46

25.7

-0.45

-0.06

8.6

80

1

1

1

3

4

1

0

2

2.05

2.68

42.4

-0.64

-0.30

10.8

86

4

2

4

5

1

4

0

FUX 9003 C

3

2.07

2.21

47.7

-1.52

-0.33

17.8

82

7

2

3

5

2

6

0

FUX 9001 A FUX 9003 C

4

1.58

1.58

48.5

-1.03

-0.06

19.7

73

3

2

0

3

3

1

0

5

2.19

2.45

52.1

-1.15

-0.14

21.5

76

6

4

1

6

3

5

0

FUX 9001 A

6

2.08

2.21

61.3

-1.30

-0.21

21.3

80

6

4

2

8

3

6

0

FUX 9001 A FUX 9003 C

7

2.11

2.13

61.7

-0.56

-0.20

14.4

81

5

4

2

8

2

5

0

FUX 9001 A FUX 9003 C

8

1.59

1.57

67.3

-1.16

-0.10

16.7

77

5

4

1

3

5

2

0

9

1.37

1.34

97.5

0.05

0.13

15.9

79

7

4

2

13

3

2

0

HEM 148 D

10

1.30

1.20

122.4

0.21

0.18

16.1

77

10

6

4

24

4

0

0

HEM 143 C HEM 148 D

11

1.89

2.61

141.4

-1.28

-0.17

20.1

77

10

9

4

10

7

4

0

FUX 9001 A HEM 148 D

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.