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PDBsum entry 1qw5

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1qw5 calculated with MOLE 2.0 PDB id
1qw5
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.93 2.14 36.7 -0.27 0.32 9.3 83 1 1 6 8 3 0 1  HEM 900 A 14W 902 A
2 1.96 2.15 77.7 0.32 0.23 10.3 72 2 3 2 8 4 1 3  HEM 900 B H4B 903 B ZN 950 B
3 1.99 2.16 99.6 -0.97 -0.01 12.1 79 3 4 10 11 5 2 1  HEM 900 B 14W 904 B
4 2.60 4.69 124.5 -0.25 0.15 10.7 74 4 4 6 7 4 3 2  H4B 903 B ZN 950 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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