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PDBsum entry 1qvi
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Tunnel analysis for: 1qvi calculated with  MOLE 2.0
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PDB id
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1qvi
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
1.23 |
29.2 |
-1.44 |
-0.62 |
13.5 |
90 |
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2 |
2 |
5 |
2 |
0 |
0 |
0 |
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2 |
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1.11 |
1.34 |
34.7 |
-1.90 |
-0.59 |
17.5 |
84 |
3 |
4 |
5 |
3 |
1 |
0 |
0 |
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3 |
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1.09 |
1.33 |
38.8 |
-1.97 |
-0.61 |
19.2 |
86 |
6 |
4 |
5 |
1 |
0 |
0 |
0 |
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4 |
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1.10 |
1.32 |
40.8 |
-1.83 |
-0.63 |
18.6 |
83 |
3 |
5 |
4 |
3 |
1 |
0 |
0 |
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5 |
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1.10 |
1.33 |
47.1 |
-1.67 |
-0.60 |
15.0 |
88 |
3 |
3 |
6 |
2 |
1 |
0 |
0 |
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6 |
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1.41 |
1.46 |
16.1 |
-0.54 |
-0.21 |
17.1 |
79 |
3 |
2 |
1 |
2 |
1 |
0 |
0 |
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7 |
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1.42 |
1.46 |
19.7 |
-0.26 |
-0.06 |
11.8 |
78 |
4 |
1 |
1 |
2 |
2 |
0 |
0 |
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8 |
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1.24 |
1.60 |
16.6 |
-0.66 |
-0.05 |
7.5 |
80 |
0 |
1 |
3 |
5 |
3 |
1 |
0 |
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9 |
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1.12 |
1.93 |
20.4 |
2.48 |
0.99 |
0.8 |
71 |
0 |
0 |
0 |
6 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program